Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX373437: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-282979' containing sample 'Staphylococcus aureus M1360'
2 ILLUMINA (Illumina HiSeq 2000) runs: 3.8M spots, 776.9M bases, 343.4Mb downloads

UUID: e0c2a59f-b03e-49e0-9f73-d2bde5d91a39

Design: Illumina sequencing of Staphylococcus aureus M1360 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA221401 • SRP032575 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M1360

SAMN02363994 • SRS498798 • All experiments • All runs

Organism: Staphylococcus aureus M1360

Library:

Name: Pond-282979

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 409507.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4WOU3

material_type: DNA:DNA Somatic

product_order: PDO-2176

product_part_number: P-WG-0004

project: G48694

research_project: RP-433

root_sample_id: SM-4D1MD

sample_id: SM-4WOU3

work_request: 38404

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-28 13:16:48.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 3.8M spots, 776.9M bases, 343.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR1025044	1,914,663	386.8M	171.2Mb	2013-11-05
SRR1025045	1,931,390	390.1M	172.2Mb	2013-11-05

ID:: 533650

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